BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB026F09LP1|AL428588
(894 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig863 1754 0.0
>3x_Contig863
Length = 2811
Score = 1754 bits (884), Expect = 0.0
Identities = 892/894 (99%), Gaps = 1/894 (0%)
Strand = Plus / Minus
Query: 1 gatcacatccaggaaaccaagcagggaagccactcaggggccacctaggcagggatcaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2233 gatcacatccaggaaaccaagcagggaagccactcaggggccacctaggcagggatcaag 2174
Query: 61 gacaaatggagcaaagggtgccgatagggaaagggggtcggaaaaaaagttccaaattga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2173 gacaaatggagcaaagggtgccgatagggaaagggggtcggaaaaaaagttccaaattga 2114
Query: 121 aaattgtatacatatcttgttacccgacgtgatggggcggcgttattgccggtaatttgt 180
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2113 aaattgtatacata-cttgttacccgacgtgatggggcggcgttattgccggtaatttgt 2055
Query: 181 ttgtggggcggaacggtagacgaagctttggatgtcacgtgtttagcatttttgtcagag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2054 ttgtggggcggaacggtagacgaagctttggatgtcacgtgtttagcatttttgtcagag 1995
Query: 241 gaagccgttgttgtcgatgaagacgacggtgatgaaatgtcagacgcaacgatggattcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1994 gaagccgttgttgtcgatgaagacgacggtgatgaaatgtcagacgcaacgatggattcc 1935
Query: 301 atcgctacatcatgtaccaatttcagttcgtcttccaaactgagctgtttcacaacgagc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1934 atcgctacatcatgtaccaatttcagttcgtcttccaaactgagctgtttcacaacgagc 1875
Query: 361 tcgacatcgagctcttctgtgtatctgtcatgacaaggtagtgcaccggcagctttatcc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1874 tcgacatcgagctcttctgtgtatctgtcatgacaaggtagtgcaccggcagctttatcc 1815
Query: 421 ttgctcttgctcttggccttgccgttctgtccagttttcttgtcgacaacaactggtact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1814 ttgctcttgctcttggccttgccgttctgtccagttttcttgtcgacaacaactggtact 1755
Query: 481 tcggctaccacttgtkgaccagacttgcgtctggtccacgtgatgccctcaggattgtat 540
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1754 tcggctaccacttgtggaccagacttgcgtctggtccacgtgatgccctcaggattgtat 1695
Query: 541 gttggatgaatcttatctctaatctttttgaacatctttcgtctgtattgctggtggtta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1694 gttggatgaatcttatctctaatctttttgaacatctttcgtctgtattgctggtggtta 1635
Query: 601 cgactggtcggggtatggcttttctcgttcttggtgaagtcatctaaacgatggagttta 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1634 cgactggtcggggtatggcttttctcgttcttggtgaagtcatctaaacgatggagttta 1575
Query: 661 tcaacctctggtgttatatacgcgtgaattatttacacaaatttttcatcactactgtaa 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1574 tcaacctctggtgttatatacgcgtgaattatttacacaaatttttcatcactactgtaa 1515
Query: 721 attcatttatcagacacaaatgtcgtgcaagtaatatgtcaactgtggtttgtgctgctt 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1514 attcatttatcagacacaaatgtcgtgcaagtaatatgtcaactgtggtttgtgctgctt 1455
Query: 781 gcttctcgtaatcgctttccactctgtgcattaaggttcttaagaaatgaaaaaaaaagc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1454 gcttctcgtaatcgctttccactctgtgcattaaggttcttaagaaatgaaaaaaaaagc 1395
Query: 841 tggagatatgggggagaatgtccaatgtccctctgttacccggccagctgacgc 894
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1394 tggagatatgggggagaatgtccaatgtccctctgttacccggccagctgacgc 1341
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6049
Number of Sequences: 1807
Number of extensions: 6049
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 894
length of database: 10,358,551
effective HSP length: 16
effective length of query: 878
effective length of database: 10,329,639
effective search space: 9069423042
effective search space used: 9069423042
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)